Position Title
Professor
- Genome Center
- Department of Evolution and Ecology, College of Biological Sciences
- Center for Population Biology
- 530-754-7729
- brannala@ucdavis.edu
- https://biology.ucdavis.edu/people/bruce-rannala
- https://rannala.org/
Research Interests
Computational evolutionary and population genomics
Research in the group focuses on mathematical aspects of population genetics, phylogenetic inference, and human genetics. Topics of interest include statistical methods for linkage disequilibrium gene mapping and Bayesian phylogenetic inference, as well as more general questions in theoretical population genetics. Topics of current research include the role of hypermutability and mutator phenotypes in cancer genetics, multipoint linkage disequilibrium mapping, and methods for detecting an association between genetic markers and disease in heterogeneous populations. A unifying theme of research in the group is the application of analytic theory and computer simulation to address questions of importance in evolutionary biology and human genetics.
Grad Group Affiliations
- Biostatistics,Statistics
- Integrative Genetics and Genomics
- Population Biology
Specialties / Focus
- Molecular Evolution
- Population and Quantitative Genetics
- Systematics and Comparative Biology
Labs
- Rannala Research Group http://www.rannala.org/
Honors and Awards
- CIHR Peter Lougheed Award (2001)
Selected Works
Z. Yang and B. Rannala. 2012. Molecular phylogenetics: principles and practice. Nature Reviews Genetics 13: 303-314.
B. Padhukasahasram and B. Rannala. 2011. Bayesian population genomic inference of crossing-over and gene-conversion. Genetics 189: 607-619.
Z. Yang and B. Rannala. 2010. Bayesian species delimitation using multilocus sequence data. Proceedings of the National Academy of Sciences USA 107: 9264-9269.
Y. Wang and B. Rannala. 2009. Population genomic inference of recombination rates and hotspots. Proceedings of the National Academy of Sciences USA 106: 6210-6214.
- 1995 Ph.D. Biological Sciences Yale University
- 1991 M.Sc. Zoology University of Toronto
- 1989 B.Sc. Zoology University of British Columbia
- Mutation ages and population origins inferred from genomes in structured populations
Journal Article | Nagel, A., Rannala, B. Genetics, iyaf204. 10.1093/genetics/iyaf204 - Reading tree leaves: inferring speciation and extinction processes using phylogenies
Journal Article | Rannala, B., Yang, Z. Philosophical Transactions of the Royal Society B Biological Sciences, 380, 20230309. 10.1098/rstb.2023.0309 - Recombination and Phylogenetic Inference
Journal Article | Rannala, B. Evolutionary Journal of the Linnean Society, 4, kzaf016. 10.1093/evolinnean/kzaf016 - : Species Tree Inference: A Guide to Methods and Applications
Journal Article | Rannala, B. The Quarterly Review of Biology, 99, 62-63. 10.1086/729266 - Bayesian Inference Under the Multispecies Coalescent with Ancient DNA Sequences
Journal Article | Nagel, A., Flouri, T., Yang, Z., Rannala, B. Systematic Biology, 73, 964-978. 10.1093/sysbio/syae047 - See publications and more on Aggie Experts: https://experts.ucdavis.edu/expert/9I1P1xJr